Transcription factor datamine for Drosophila melanogaster
Transcription factor datamine for Drosophila melanogaster
The categories below provide views of the different types of data. Each category includes details of the data available, template queries which include these data and starting points for building your own query using these data. NOTE: All external links open in a new window.
| Data Category | Organism | Data | Source | PubMed | Note |
|---|---|---|---|---|---|
|
Genomics |
Drosophila | Genome annotation for D. melanogaster (R5.11). Orthologous Drosophilid genes also annotated. | Flybase - Version FB2009_07 | Crosby et al - PubMed: 17099233 | |
|
Proteins |
D. melanogaster | Protein annotation |
UniProt - Release 15.1 |
UniProt Consortium - PubMed: 17142230 |
|
|
Protein Structure |
D. melanogaster | Structural annotations and predictions from PFAM and InterPro |
PFam - 23.0 InterPro - 22.0 |
PFam - PubMed:18039703 |
|
|
Gene Ontology |
D. melanogaster | GO annotations | Gene Ontology Site - 1st May 2009 | Gene Ontology Consortium - PubMed:10802651 | |
|
Transcription Factor Annotation |
D. melanogaster | Curation of computationally predicted and/or experimentally verified site-specific transcription factors. | FlyTF.org - v. 2 | Adryan & Teichmann - PubMed: 16613907 |
