Package org.intermine.task

Class Summary
AcceptanceTestTask A Task to run acceptance tests, configurable from a file.
AnalyseDbTask Task to run ANALYSE on a table or whole database.
BuildDbTask Generates and inserts SQL given database name, schema and temporary directory
ConverterTask Task superclass for invoking converters.
CreateIndexesTask Task to create indexes on a database holding objects conforming to a given model by reading that model's primary key configuration information.
DBConverterTask Task to call DBConverters.
DelimitedFileConfiguration This class specifies how the values in a tab or comma separated file should be used to fill in objects in an ObjectStore.
DirectDataLoaderTask This task uses a DirectDataLoader to create objects and store them directly into an ObjectStore using an IntegrationWriter.
DirectoryConverterTask Initiates retrieval and conversion of data from a source directory.
DropPrecomputedTablesTask A Task that drops all precomputed tables in an ObjectStore.
DynamicAttributeTask An ant task that provides a method for setting attributes dynamically within a class.
FileConverterTask Initiates retrieval and conversion of data from a source file.
FileDirectDataLoaderTask A DirectDataLoaderTask for files.
FullXmlConverterTask Load InterMine Items XML file(s) into a target items database.
GrantTask Task to grant permissions on all tables in a database to a given user.
ModelMergerTask Task to merge a single additions file into an intermine XML model.
ModelOutputTask Creates and runs a ModelOutput process to generate java or config files.
PostProcessorTask Generic defn of a post process step...
PrecomputeTask A Task that reads a list of queries from a properties file (eg. testmodel_precompute.properties) and calls ObjectStoreInterMineImpl.precompute() using the Query.
RetrieveMetadataTask Retrieve the model metadata from a database
StaticMethodTask Given a class name and method name, just invokes a static method.
StoreMetadataTask Store model metadata to a database
SummariseObjectStoreTask Summarise an ObjectStore into a particular properties file.
TSVFileReaderTask Read a file of tab separated values.