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Data Categories

Select a category to see more information about the data sets included. Each category includes associated templates and lists.
Genomics Comparative Genomics
Proteins Protein Structure
Interactions Gene Ontology
Gene Expression Transcriptional Regulation
Phenotypes Pathways
Disease Literature
Resources

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   After querying the data, you can review a summary for each results column.  Read more ...

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Templates

Templates are predefined queries, each has a simple form and a description. You can edit templates in the QueryBuilder, if you log in you can create new templates yourself.
Example templates (201 total):

Lists

You can run queries on whole lists of data. Create lists from the results of a query or by uploading identifiers. Click on a list to view graphs and summaries in a list analysis page, if you log in you can save lists permanently.


Example lists (26 total):
  • PL dme_immunity_genes (369 Genes)
    D. melanogaster genes potentially involved in responses to microbial infection (Data Source: http://lemaitrelab.epfl.ch/Jahia/site/lemaitrelab/op/edit/pid/27282).
  • PL sperm_proteome_genes (384 Genes)
    Genes encoding the D. melanogaster sperm proteome (Source: Dorus et al 2006 - PubMed: 17099233).



Query Builder

You can use the flexible query interface to construct your own data mining queries. A good way to start is by editing an existing template.


Start a query from:  Gene, Protein





FlyMine is funded through grants from the Wellcome Trust and the U.S. NIH/NHGRI.